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Profit-first eCommerce Accounting for Ambitious Amazon & Shopify Brands

We help sellers take control of their margins, VAT, cash flow, and inventory - so they can grow with clarity and confidence.

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Built for UK VAT, MTD, and cross-channel complexity

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Drowning in spreadsheets, VAT confusion, and zero cash clarity?

You didn’t build your e-commerce brand to become a part-time accountant. We’ve seen it all — late filings, stockouts, broken margins. Margintree is built to fix that, fast.

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Why 6–7 Figure Sellers Choose Margintree

Built by an accountant who lives eCommerce.

“With years of accounting experience and a mission to simplify e-commerce finances, I started Margintree for eCommerce founders who want clarity, control, and confidence - without the spreadsheets.”

Profit-first, not just compliance-ready

We focus on margins, stock insights, and cash clarity — not just year-end numbers.

Fully integrated with your eCom stack

Amazon, Shopify, TikTok Shop, A2X, Xero, LinkMyBooks — we handle it all.

Founder-friendly, built to scale with you

From £250k to £2M+, we’re your partner in growth, not just your accountant.

No jargon. Just smart advice that makes sense.

We translate numbers into actions, so you can make confident decisions.

How It Works

  1. Book a Free Profit Call – We audit your setup and goals
  2. We onboard you seamlessly – Setup your stack + integrations
  3. You get insights & support – Monthly reports, answers, advice
  4. You grow with financial clarity – With numbers that finally make sense
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What We Do Best

MTD-ready bookkeeping

Amazon, Shopify & TikTok sales, payouts, COGS, expenses, fees.

VAT Compliance

Accurate UK VAT returns — no spreadsheets, no penalties.

Inventory Reconciliation & COGS Insights

Know your stock value, margins & restock costs — accurately, always.

Cash Flow Clarity

Get smart cash forecasting, profit visibility, and runway planning.

Performance Dashboards

Live dashboards with real metrics that drive smart decisions.

Founders-Only Advisory

Ask anything — we’re your finance partner, not just a service.

eCommerce Accounting Software

Seamless integration with leading platforms for automated, accurate finances.

What Sellers Are Saying

Sarah A.

“We finally know what’s really going on with our profits. Margintree gave us clarity we didn’t know we needed.”

– Sarah A., Amazon Homeware Seller, £900k rev
Emma

“VAT was a nightmare. They fixed everything and explained it so well. Now I just focus on selling.”

– Emma, 6-figure beauty brand founder

Simple Pricing, Tailored to Your Stage

Starter

From £297/mo + VAT

Built for growing Amazon or Shopify sellers doing under £500k annual revenue

  • Weekly bookkeeping & reconciliations
  • A2X integration + Xero setup
  • Monthly P&L, balance sheet, and cash snapshot
  • Basic VAT filing & MTD compliance
  • Lite email support
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Scale

From £797/mo + VAT

Built for 7-figure brands doing £1.2M–£2M+, ready to build a CFO-level finance function

  • Everything in Growth, plus:
  • Tax forecasting (no surprises in Jan)
  • Real-time cash flow dashboard
  • Monthly founder finance call
  • Amazon reimbursements, FBA fees deep dive
  • Business model tuning (CAC, ROAS, inventory ROI)
  • Priority support + Slack channel
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Add-Ons

  • Catch-up bookkeeping – from £150/mo
  • VAT registration (UK/EU) – £150 flat
  • Payroll (via partner) – £49/mo
  • Corporation Tax + Year-End Accounts (via partner) – from £595
  • Business finance toolkit (one-time digital pack) – £97

All pricing is monthly, fixed, and fully transparent. Annual plans available with discount.

Need something custom or not sure which plan fits? Contact us.

Frequently Asked Questions

Can I switch from my current accountant?

Yes — we handle the handover and make it seamless.

Do you support global e-commerce sellers?

Yes. We specialize in UK-based entities but support EU/US platforms & payments.

What software do I need?

We work best with Xero, A2X, LinkMyBooks, and Shopify/Amazon integrations.

Do you do tax filing?

We handle VAT in-house. For income and corporation tax, we work with trusted partners and integrate it seamlessly into your books.

Book Your Profit Review

We work with serious eCommerce founders who want more than just a bookkeeper.